J4_3JAI_004

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

3JAI|1|5|C|216, 3JAI|1|5|C|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|C|196
3JAI|1|5|A|197
3JAI|1|5|A|198
3JAI|1|5|G|199
*
3JAI|1|5|C|215
3JAI|1|5|C|216
3JAI|1|5|C|217
3JAI|1|5|A|218
3JAI|1|5|G|219
3JAI|1|5|C|220
3JAI|1|5|C|221
3JAI|1|5|C|222
*
3JAI|1|5|G|226
3JAI|1|5|A|227
3JAI|1|5|C|228
*
3JAI|1|5|G|240
3JAI|1|5|G|241
3JAI|1|5|U|242
3JAI|1|5|A|243
3JAI|1|5|G|244

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain Y

uL24