3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
UCUC*GCCGG*CCACGCGCGC*GGCGGAGCGA
Length
29 nucleotides
Bulged bases
3JAI|1|5|C|1237, 3JAI|1|5|G|1244, 3JAI|1|5|G|1273
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|5|U|980
3JAI|1|5|C|981
3JAI|1|5|U|982
3JAI|1|5|C|983
*
3JAI|1|5|G|1070
3JAI|1|5|C|1071
3JAI|1|5|C|1072
3JAI|1|5|G|1073
3JAI|1|5|G|1074
*
3JAI|1|5|C|1236
3JAI|1|5|C|1237
3JAI|1|5|A|1238
3JAI|1|5|C|1239
3JAI|1|5|G|1240
3JAI|1|5|C|1241
3JAI|1|5|G|1242
3JAI|1|5|C|1243
3JAI|1|5|G|1244
3JAI|1|5|C|1245
*
3JAI|1|5|G|1265
3JAI|1|5|G|1266
3JAI|1|5|C|1267
3JAI|1|5|G|1268
3JAI|1|5|G|1269
3JAI|1|5|A|1270
3JAI|1|5|G|1271
3JAI|1|5|C|1272
3JAI|1|5|G|1273
3JAI|1|5|A|1274

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain C
uL4
Chain E
eL6
Chain F
uL30

Coloring options:

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