J4_3JAI_010

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

3JAI|1|5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|C|3696
3JAI|1|5|U|3697
3JAI|1|5|G|3698
*
3JAI|1|5|C|3752
3JAI|1|5|G|3753
3JAI|1|5|G|3754
*
3JAI|1|5|U|3770
3JAI|1|5|C|3771
3JAI|1|5|U|3772
3JAI|1|5|U|3773
3JAI|1|5|A|3774
3JAI|1|5|A|3775
3JAI|1|5|G|3776
3JAI|1|5|G|3777
3JAI|1|5|U|3778
3JAI|1|5|A|3779
3JAI|1|5|G|3780
*
3JAI|1|5|U|3814
3JAI|1|5|G|3815
3JAI|1|5|A|3816
3JAI|1|5|A|3817
3JAI|1|5|U|3818
3JAI|1|5|G|3819

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 2

Transfer RNA; tRNA

Chain 9

Small subunit ribosomal RNA; SSU rRNA

Chain A

uL2

Chain n

eL41