J4_3JAI_011

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

3JAI|1|5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|C|4231
3JAI|1|5|U|4232
3JAI|1|5|A|4233
3JAI|1|5|A|4234
3JAI|1|5|G|4235
*
3JAI|1|5|U|4289
3JAI|1|5|U|4290
3JAI|1|5|G|4291
*
3JAI|1|5|C|4318
3JAI|1|5|C|4319
*
3JAI|1|5|G|4328
3JAI|1|5|G|4329
3JAI|1|5|G|4330

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

uL18

Chain T

eL21

Chain o

eL42