J4_3JCD_002
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUAGC*GCAGG*CCGUGUCCUU*GAGU
- Length
- 24 nucleotides
- Bulged bases
- 3JCD|1|9|U|8, 3JCD|1|9|U|47, 3JCD|1|9|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCD|1|9|A|7
3JCD|1|9|U|8
3JCD|1|9|A|9
3JCD|1|9|G|10
3JCD|1|9|C|11
*
3JCD|1|9|G|24
3JCD|1|9|C|25
3JCD|1|9|A|26
3JCD|1|9|G|27
3JCD|1|9|G|28
*
3JCD|1|9|C|42
3JCD|1|9|C|43
3JCD|1|9|G|44
3JCD|1|9|U|45
3JCD|1|9|G|46
3JCD|1|9|U|47
3JCD|1|9|C|48
3JCD|1|9|C|49
3JCD|1|9|U|50
3JCD|1|9|U|51
*
3JCD|1|9|G|63
3JCD|1|9|A|64
3JCD|1|9|G|65
3JCD|1|9|U|66
Current chains
- Chain 9
- tRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 5
- 50S ribosomal protein L1
- Chain g
- 30S ribosomal protein S7
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