J4_3JCD_015
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCG*CGAAAGC*GCCGUAAACGAUGUC*GACC
- Length
- 29 nucleotides
- Bulged bases
- 3JCD|1|a|C|576, 3JCD|1|a|A|815, 3JCD|1|a|C|817, 3JCD|1|a|A|819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCD|1|a|G|575
3JCD|1|a|C|576
3JCD|1|a|G|577
*
3JCD|1|a|C|764
3JCD|1|a|G|765
3JCD|1|a|A|766
3JCD|1|a|A|767
3JCD|1|a|A|768
3JCD|1|a|G|769
3JCD|1|a|C|770
*
3JCD|1|a|G|809
3JCD|1|a|C|810
3JCD|1|a|C|811
3JCD|1|a|G|812
3JCD|1|a|U|813
3JCD|1|a|A|814
3JCD|1|a|A|815
3JCD|1|a|A|816
3JCD|1|a|C|817
3JCD|1|a|G|818
3JCD|1|a|A|819
3JCD|1|a|U|820
3JCD|1|a|G|821
3JCD|1|a|U|822
3JCD|1|a|C|823
*
3JCD|1|a|G|877
3JCD|1|a|A|878
3JCD|1|a|C|879
3JCD|1|a|C|880
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- 50S ribosomal protein L2
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
- Chain u
- 30S ribosomal protein S21
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