J4_3OW2_002

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

ACGAAG*CGUG*CAG*CGUACU

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3OW2_002 not in the Motif Atlas

Homologous match to J4_4V9F_002

Geometric discrepancy: 0.0383

The information below is about J4_4V9F_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_11418.1

Basepair signature

cWW-F-F-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|A|302
3OW2|1|0|C|303
3OW2|1|0|G|304
3OW2|1|0|A|305
3OW2|1|0|A|306
3OW2|1|0|G|307
*
3OW2|1|0|C|323
3OW2|1|0|G|324
3OW2|1|0|U|325
3OW2|1|0|G|326
*
3OW2|1|0|C|330
3OW2|1|0|A|331
3OW2|1|0|G|332
*
3OW2|1|0|C|344
3OW2|1|0|G|345
3OW2|1|0|U|346
3OW2|1|0|A|347
3OW2|1|0|C|348
3OW2|1|0|U|349

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain S

50S ribosomal protein L24P