J4_3OW2_010

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GAAC*GG*CACG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3OW2_010 not in the Motif Atlas

Homologous match to J4_4V9F_010

Geometric discrepancy: 0.1288

The information below is about J4_4V9F_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_28473.1

Basepair signature

cWW-F-F-F-cWW-cWW-F-cWW-F

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|G|2679
3OW2|1|0|A|2680
3OW2|1|0|A|2681
3OW2|1|0|C|2682
*
3OW2|1|0|G|2712
3OW2|1|0|G|2713
*
3OW2|1|0|C|2767
3OW2|1|0|A|2768
3OW2|1|0|C|2769
3OW2|1|0|G|2770
*
3OW2|1|0|C|2804
3OW2|1|0|A|2805
3OW2|1|0|C|2806

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain I

50S ribosomal protein L13P

Chain J

50S ribosomal protein L14P