J4_3R8O_004
3D structure
- PDB id
- 3R8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGGA*UACAAUG*CGUAGUCCGGAUU*AUGAAGUCGGAA
- Length
- 36 nucleotides
- Bulged bases
- 3R8O|1|A|U|1240, 3R8O|1|A|C|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3R8O|1|A|U|943
3R8O|1|A|G|944
3R8O|1|A|G|945
3R8O|1|A|A|946
*
3R8O|1|A|U|1235
3R8O|1|A|A|1236
3R8O|1|A|C|1237
3R8O|1|A|A|1238
3R8O|1|A|A|1239
3R8O|1|A|U|1240
3R8O|1|A|G|1241
*
3R8O|1|A|C|1296
3R8O|1|A|G|1297
3R8O|1|A|U|1298
3R8O|1|A|A|1299
3R8O|1|A|G|1300
3R8O|1|A|U|1301
3R8O|1|A|C|1302
3R8O|1|A|C|1303
3R8O|1|A|G|1304
3R8O|1|A|G|1305
3R8O|1|A|A|1306
3R8O|1|A|U|1307
3R8O|1|A|U|1308
*
3R8O|1|A|A|1329
3R8O|1|A|U|1330
3R8O|1|A|G|1331
3R8O|1|A|A|1332
3R8O|1|A|A|1333
3R8O|1|A|G|1334
3R8O|1|A|U|1335
3R8O|1|A|C|1336
3R8O|1|A|G|1337
3R8O|1|A|G|1338
3R8O|1|A|A|1339
3R8O|1|A|A|1340
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain M
- 30S ribosomal protein S13
- Chain V
- Transfer RNA; tRNA
Coloring options: