J4_3WC2_003
3D structure
- PDB id
- 3WC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of C. albicans tRNA(His) guanylyltransferase (Thg1) with a tRNA(Phe)(GUG)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- UUAG*CGC*GAGGUCC*GA
- Length
- 16 nucleotides
- Bulged bases
- 3WC2|1|Q|U|8, 3WC2|1|Q|A|9, 3WC2|1|Q|G|46, 3WC2|1|Q|U|47, 3WC2|1|Q|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3WC2_003 not in the Motif Atlas
- Homologous match to J4_7K98_001
- Geometric discrepancy: 0.2586
- The information below is about J4_7K98_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_58311.1
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
3WC2|1|Q|U|7
3WC2|1|Q|U|8
3WC2|1|Q|A|9
3WC2|1|Q|G|10
*
3WC2|1|Q|C|25
3WC2|1|Q|G|26
3WC2|1|Q|C|27
*
3WC2|1|Q|G|43
3WC2|1|Q|A|44
3WC2|1|Q|G|45
3WC2|1|Q|G|46
3WC2|1|Q|U|47
3WC2|1|Q|C|48
3WC2|1|Q|C|49
*
3WC2|1|Q|G|65
3WC2|1|Q|A|66
Current chains
- Chain Q
- 76mer-tRNA
Nearby chains
- Chain A
- Likely histidyl tRNA-specific guanylyltransferase
- Chain B
- Likely histidyl tRNA-specific guanylyltransferase
- Chain C
- Likely histidyl tRNA-specific guanylyltransferase
- Chain D
- Likely histidyl tRNA-specific guanylyltransferase
Coloring options: