J4_4DR1_002
3D structure
- PDB id
- 4DR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the apo 30S ribosomal subunit from Thermus thermophilus (HB8)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGG*CCAUGUG*CAAAG*CGC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4DR1|1|A|G|142
4DR1|1|A|A|143
4DR1|1|A|G|144
4DR1|1|A|G|145
*
4DR1|1|A|C|177
4DR1|1|A|C|178
4DR1|1|A|A|179
4DR1|1|A|U|180
4DR1|1|A|G|181
4DR1|1|A|U|182
4DR1|1|A|G|183
*
4DR1|1|A|C|194
4DR1|1|A|A|195
4DR1|1|A|A|196
4DR1|1|A|A|197
4DR1|1|A|G|198
*
4DR1|1|A|C|219
4DR1|1|A|G|220
4DR1|1|A|C|221
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- 30S ribosomal protein S20
Coloring options: