3D structure

PDB id
4DV2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
Experimental method
X-RAY DIFFRACTION
Resolution
3.65 Å

Loop

Sequence
GAGGGG*CCCCAUGUG*CAAAG*CGC
Length
23 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4DV2|1|A|G|142
4DV2|1|A|A|143
4DV2|1|A|G|144
4DV2|1|A|G|145
4DV2|1|A|G|146
4DV2|1|A|G|147
*
4DV2|1|A|C|175
4DV2|1|A|C|176
4DV2|1|A|C|177
4DV2|1|A|C|178
4DV2|1|A|A|179
4DV2|1|A|U|180
4DV2|1|A|G|181
4DV2|1|A|U|182
4DV2|1|A|G|183
*
4DV2|1|A|C|194
4DV2|1|A|A|195
4DV2|1|A|A|196
4DV2|1|A|A|197
4DV2|1|A|G|198
*
4DV2|1|A|C|219
4DV2|1|A|G|220
4DV2|1|A|C|221

Current chains

Chain A
16S rRNA

Nearby chains

Chain T
ribosomal protein S20

Coloring options:

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