J4_4JI5_004
3D structure
- PDB id
- 4JI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- UGGA*UACAAUG*CCCAGUUC*GCCGGAA
- Length
- 26 nucleotides
- Bulged bases
- 4JI5|1|A|U|1240, 4JI5|1|A|U|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4JI5|1|A|U|943
4JI5|1|A|G|944
4JI5|1|A|G|945
4JI5|1|A|A|946
*
4JI5|1|A|U|1235
4JI5|1|A|A|1236
4JI5|1|A|C|1237
4JI5|1|A|A|1238
4JI5|1|A|A|1239
4JI5|1|A|U|1240
4JI5|1|A|G|1241
*
4JI5|1|A|C|1296
4JI5|1|A|C|1297
4JI5|1|A|C|1298
4JI5|1|A|A|1299
4JI5|1|A|G|1300
4JI5|1|A|U|1301
4JI5|1|A|U|1302
4JI5|1|A|C|1303
*
4JI5|1|A|G|1334
4JI5|1|A|C|1335
4JI5|1|A|C|1336
4JI5|1|A|G|1337
4JI5|1|A|G|1338
4JI5|1|A|A|1339
4JI5|1|A|A|1340
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- RIBOSOMAL PROTEIN S7
- Chain I
- RIBOSOMAL PROTEIN S9
- Chain M
- RIBOSOMAL PROTEIN S13
- Chain U
- RIBOSOMAL PROTEIN THX
Coloring options: