J4_4LFZ_003
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- CGUAAAGGG*CGAAAG*CCCUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 4LFZ|1|QA|A|572, 4LFZ|1|QA|G|576, 4LFZ|1|QA|A|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4LFZ|1|QA|C|569
4LFZ|1|QA|G|570
4LFZ|1|QA|U|571
4LFZ|1|QA|A|572
4LFZ|1|QA|A|573
4LFZ|1|QA|A|574
4LFZ|1|QA|G|575
4LFZ|1|QA|G|576
4LFZ|1|QA|G|577
*
4LFZ|1|QA|C|764
4LFZ|1|QA|G|765
4LFZ|1|QA|A|766
4LFZ|1|QA|A|767
4LFZ|1|QA|A|768
4LFZ|1|QA|G|769
*
4LFZ|1|QA|C|810
4LFZ|1|QA|C|811
4LFZ|1|QA|C|812
4LFZ|1|QA|U|813
4LFZ|1|QA|A|814
4LFZ|1|QA|A|815
4LFZ|1|QA|A|816
4LFZ|1|QA|C|817
4LFZ|1|QA|G|818
4LFZ|1|QA|A|819
4LFZ|1|QA|U|820
4LFZ|1|QA|G|821
*
4LFZ|1|QA|C|879
4LFZ|1|QA|C|880
4LFZ|1|QA|G|881
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QH
- 30S ribosomal protein S8
- Chain QL
- 30S ribosomal protein S12
- Chain QO
- 30S ribosomal protein S15
- Chain QQ
- 30S ribosomal protein S17
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: