J4_4LFZ_009

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

GGGUUC*GGUUAG*CU*ACCCGUACC

Length

23 nucleotides

Bulged bases

4LFZ|1|RA|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4LFZ|1|RA|G|1309
4LFZ|1|RA|G|1310
4LFZ|1|RA|G|1311
4LFZ|1|RA|U|1312
4LFZ|1|RA|U|1313
4LFZ|1|RA|C|1314
*
4LFZ|1|RA|G|1338
4LFZ|1|RA|G|1339
4LFZ|1|RA|U|1340
4LFZ|1|RA|U|1341
4LFZ|1|RA|A|1342
4LFZ|1|RA|G|1343
*
4LFZ|1|RA|C|1404
4LFZ|1|RA|U|1405
*
4LFZ|1|RA|A|1597
4LFZ|1|RA|C|1598
4LFZ|1|RA|C|1599
4LFZ|1|RA|C|1600
4LFZ|1|RA|G|1601
4LFZ|1|RA|U|1602
4LFZ|1|RA|A|1603
4LFZ|1|RA|C|1604
4LFZ|1|RA|C|1605

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R7

50S ribosomal protein L34

Chain RX

50S ribosomal protein L23