J4_4LT8_025
3D structure
- PDB id
- 4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- GACUG*CACAG*CGAC*GUAAC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4LT8_025 not in the Motif Atlas
- Homologous match to J4_9DFE_007
- Geometric discrepancy: 0.0519
- The information below is about J4_9DFE_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61477.6
- Basepair signature
- cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4LT8|1|YA|G|1772
4LT8|1|YA|A|1773
4LT8|1|YA|C|1774
4LT8|1|YA|U|1775
4LT8|1|YA|G|1776
*
4LT8|1|YA|C|1788
4LT8|1|YA|A|1789
4LT8|1|YA|C|1790
4LT8|1|YA|A|1791
4LT8|1|YA|G|1792
*
4LT8|1|YA|C|1827
4LT8|1|YA|G|1828
4LT8|1|YA|A|1829
4LT8|1|YA|C|1830
*
4LT8|1|YA|G|1975
4LT8|1|YA|U|1976
4LT8|1|YA|A|1977
4LT8|1|YA|A|1978
4LT8|1|YA|C|1979
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain YD
- 50S ribosomal protein L2
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