J4_4RDX_003
3D structure
- PDB id
- 4RDX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of histidinyl-tRNA synthetase in complex with tRNA(His)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GUAG*CAC*GGGGUCG*UC
- Length
- 16 nucleotides
- Bulged bases
- 4RDX|1|C|U|8, 4RDX|1|C|U|47, 4RDX|1|C|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.28
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
4RDX|1|C|G|7
4RDX|1|C|U|8
4RDX|1|C|A|9
4RDX|1|C|G|10
*
4RDX|1|C|C|25
4RDX|1|C|A|26
4RDX|1|C|C|27
*
4RDX|1|C|G|43
4RDX|1|C|G|44
4RDX|1|C|G|45
4RDX|1|C|G|46
4RDX|1|C|U|47
4RDX|1|C|C|48
4RDX|1|C|G|49
*
4RDX|1|C|U|65
4RDX|1|C|C|66
Current chains
- Chain C
- tRNA(his)
Nearby chains
- Chain A
- Histidine--tRNA ligase
Coloring options: