J4_4TUC_008
3D structure
- PDB id
- 4TUC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUUC*GGUUAG*CU*ACCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 4TUC|1|RA|U|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4TUC_008 not in the Motif Atlas
- Homologous match to J4_9DFE_004
- Geometric discrepancy: 0.0866
- The information below is about J4_9DFE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_77353.1
- Basepair signature
- cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
4TUC|1|RA|G|1310
4TUC|1|RA|G|1311
4TUC|1|RA|U|1312
4TUC|1|RA|U|1313
4TUC|1|RA|C|1314
*
4TUC|1|RA|G|1338
4TUC|1|RA|G|1339
4TUC|1|RA|U|1340
4TUC|1|RA|U|1341
4TUC|1|RA|A|1342
4TUC|1|RA|G|1343
*
4TUC|1|RA|C|1404
4TUC|1|RA|U|1405
*
4TUC|1|RA|A|1597
4TUC|1|RA|C|1598
4TUC|1|RA|C|1599
4TUC|1|RA|C|1600
4TUC|1|RA|G|1601
4TUC|1|RA|U|1602
4TUC|1|RA|A|1603
4TUC|1|RA|C|1604
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
- Chain RX
- 50S ribosomal protein L23
Coloring options: