J4_4TUE_004
3D structure
- PDB id
- 4TUE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 4TUE|1|QV|U|7, 4TUE|1|QV|U|47, 4TUE|1|QV|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.26
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 56
Unit IDs
4TUE|1|QV|G|6
4TUE|1|QV|U|7
4TUE|1|QV|G|8
4TUE|1|QV|G|9
*
4TUE|1|QV|C|25
4TUE|1|QV|G|26
4TUE|1|QV|U|27
*
4TUE|1|QV|A|43
4TUE|1|QV|A|44
4TUE|1|QV|G|45
4TUE|1|QV|G|46
4TUE|1|QV|U|47
4TUE|1|QV|C|48
4TUE|1|QV|G|49
*
4TUE|1|QV|C|65
4TUE|1|QV|C|66
Current chains
- Chain QV
- P-site tRNA-fMet
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QM
- 30S ribosomal protein S13
- Chain R0
- 50S ribosomal protein L27
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RQ
- 50S ribosomal protein L16
Coloring options: