J4_4U26_032

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GG*UU*ACGAG*UGAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4U26_032 not in the Motif Atlas

Homologous match to J4_7A0S_007

Geometric discrepancy: 0.3161

The information below is about J4_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_91813.1

Basepair signature

cWW-cWW-F-tSH-cWW-F-F-F-cWW-F

Number of instances in this motif group

1

Unit IDs

4U26|1|DA|G|1444
4U26|1|DA|G|1445
*
4U26|1|DA|U|1466
4U26|1|DA|U|1467
*
4U26|1|DA|A|1525
4U26|1|DA|C|1526
4U26|1|DA|G|1527
4U26|1|DA|A|1528
4U26|1|DA|G|1529
*
4U26|1|DA|U|1542
4U26|1|DA|G|1543
4U26|1|DA|A|1544
4U26|1|DA|A|1545
4U26|1|DA|G|1546
4U26|1|DA|C|1547

Current chains

Chain DA

23S rRNA

Nearby chains