J4_4U27_030

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCAG*CGAUGAGUAG*UGAAUAUG*CAAG

Length

26 nucleotides

Bulged bases

4U27|1|DA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|C|268
4U27|1|DA|C|269
4U27|1|DA|A|270
4U27|1|DA|G|271
*
4U27|1|DA|C|366
4U27|1|DA|G|367
4U27|1|DA|A|368
4U27|1|DA|U|369
4U27|1|DA|G|370
4U27|1|DA|A|371
4U27|1|DA|G|372
4U27|1|DA|U|373
4U27|1|DA|A|374
4U27|1|DA|G|375
*
4U27|1|DA|U|399
4U27|1|DA|G|400
4U27|1|DA|A|401
4U27|1|DA|A|402
4U27|1|DA|U|403
4U27|1|DA|A|404
4U27|1|DA|U|405
4U27|1|DA|G|406
*
4U27|1|DA|C|421
4U27|1|DA|A|422
4U27|1|DA|A|423
4U27|1|DA|G|424

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DH

50S ribosomal protein L9

Chain DX

50S ribosomal protein L28