J4_4U67_008

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GAGU*AAC*GAACG*CAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U67|1|X|G|2622
4U67|1|X|A|2623
4U67|1|X|G|2624
4U67|1|X|U|2625
*
4U67|1|X|A|2653
4U67|1|X|A|2654
4U67|1|X|C|2655
*
4U67|1|X|G|2712
4U67|1|X|A|2713
4U67|1|X|A|2714
4U67|1|X|C|2715
4U67|1|X|G|2716
*
4U67|1|X|C|2748
4U67|1|X|A|2749
4U67|1|X|G|2750
4U67|1|X|C|2751

Current chains

Chain X

23s RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain H

50S ribosomal protein L14