J4_4V4G_001

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GUGAGUAACGC*GUC*GUAGCC*GGCCAC

Length

26 nucleotides

Bulged bases

4V4G|1|AA|U|239

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|AA|G|113
4V4G|1|AA|U|114
4V4G|1|AA|G|115
4V4G|1|AA|A|116
4V4G|1|AA|G|117
4V4G|1|AA|U|118
4V4G|1|AA|A|119
4V4G|1|AA|A|120
4V4G|1|AA|C|121
4V4G|1|AA|G|122
4V4G|1|AA|C|123
*
4V4G|1|AA|G|238
4V4G|1|AA|U|239
4V4G|1|AA|C|240
*
4V4G|1|AA|G|286
4V4G|1|AA|U|287
4V4G|1|AA|A|288
4V4G|1|AA|G|289
4V4G|1|AA|C|290
4V4G|1|AA|C|291
*
4V4G|1|AA|G|309
4V4G|1|AA|G|310
4V4G|1|AA|C|311
4V4G|1|AA|C|312
4V4G|1|AA|A|313
4V4G|1|AA|C|314

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16

Chain AQ

30S ribosomal protein S17