J4_4V4Q_002

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V4Q|1|AA|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4Q|1|AA|G|142
4V4Q|1|AA|A|143
4V4Q|1|AA|G|144
*
4V4Q|1|AA|C|178
4V4Q|1|AA|A|179
4V4Q|1|AA|U|180
4V4Q|1|AA|A|181
4V4Q|1|AA|A|182
4V4Q|1|AA|C|183
4V4Q|1|AA|G|184
*
4V4Q|1|AA|C|193
4V4Q|1|AA|C|194
4V4Q|1|AA|A|195
4V4Q|1|AA|A|196
4V4Q|1|AA|A|197
4V4Q|1|AA|G|198
*
4V4Q|1|AA|U|219
4V4Q|1|AA|G|220
4V4Q|1|AA|C|221

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20