J4_4V4T_016
3D structure
- PDB id
- 4V4T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex with a stop codon in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.46 Å
Loop
- Sequence
- CUAGCCGAAG*CGCC*GAG*CGUAGGCGAAAG
- Length
- 29 nucleotides
- Bulged bases
- 4V4T|1|BA|G|338, 4V4T|1|BA|G|344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4T|1|BA|C|292
4V4T|1|BA|U|293
4V4T|1|BA|A|294
4V4T|1|BA|G|295
4V4T|1|BA|C|296
4V4T|1|BA|C|297
4V4T|1|BA|G|298
4V4T|1|BA|A|299
4V4T|1|BA|A|300
4V4T|1|BA|G|301
*
4V4T|1|BA|C|316
4V4T|1|BA|G|317
4V4T|1|BA|C|318
4V4T|1|BA|C|319
*
4V4T|1|BA|G|323
4V4T|1|BA|A|324
4V4T|1|BA|G|325
*
4V4T|1|BA|C|337
4V4T|1|BA|G|338
4V4T|1|BA|U|339
4V4T|1|BA|A|340
4V4T|1|BA|G|341
4V4T|1|BA|G|342
4V4T|1|BA|C|343
4V4T|1|BA|G|344
4V4T|1|BA|A|345
4V4T|1|BA|A|346
4V4T|1|BA|A|347
4V4T|1|BA|G|348
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BF
- 50S ribosomal protein L4
- Chain BY
- 50S ribosomal protein 24
Coloring options: