J4_4V4X_013

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

GACC*GGCC*GGGGAAG*UGACAACC

Length

23 nucleotides

Bulged bases

4V4X|1|BA|A|1529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|BA|G|1444
4V4X|1|BA|A|1444|||A
4V4X|1|BA|C|1445
4V4X|1|BA|C|1446
*
4V4X|1|BA|G|1465
4V4X|1|BA|G|1466
4V4X|1|BA|C|1467
4V4X|1|BA|C|1468
*
4V4X|1|BA|G|1524
4V4X|1|BA|G|1525
4V4X|1|BA|G|1526
4V4X|1|BA|G|1527
4V4X|1|BA|A|1528
4V4X|1|BA|A|1529
4V4X|1|BA|G|1530
*
4V4X|1|BA|U|1541
4V4X|1|BA|G|1542
4V4X|1|BA|A|1543
4V4X|1|BA|C|1544
4V4X|1|BA|A|1545
4V4X|1|BA|A|1545|||A
4V4X|1|BA|C|1546
4V4X|1|BA|C|1547

Current chains

Chain BA

23S ribosomal RNA

Nearby chains