J4_4V4Z_008

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GGGUU*GUUAG*CU*ACCCGUACC

Length

21 nucleotides

Bulged bases

4V4Z|1|BA|G|1311, 4V4Z|1|BA|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4Z|1|BA|G|1309
4V4Z|1|BA|G|1310
4V4Z|1|BA|G|1311
4V4Z|1|BA|U|1312
4V4Z|1|BA|U|1313
*
4V4Z|1|BA|G|1339
4V4Z|1|BA|U|1340
4V4Z|1|BA|U|1341
4V4Z|1|BA|A|1342
4V4Z|1|BA|G|1343
*
4V4Z|1|BA|C|1404
4V4Z|1|BA|U|1405
*
4V4Z|1|BA|A|1597
4V4Z|1|BA|C|1598
4V4Z|1|BA|C|1599
4V4Z|1|BA|C|1600
4V4Z|1|BA|G|1601
4V4Z|1|BA|U|1602
4V4Z|1|BA|A|1603
4V4Z|1|BA|C|1604
4V4Z|1|BA|C|1605

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B6

50S RIBOSOMAL PROTEIN L34

Chain BW

50S RIBOSOMAL PROTEIN L23