J4_4V4Z_015

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GAC*GCCAGAAG*CGUGGUGGGG*CAACC

Length

26 nucleotides

Bulged bases

4V4Z|1|BA|A|1444|||A, 4V4Z|1|BA|G|1470, 4V4Z|1|BA|A|1472, 4V4Z|1|BA|U|1520

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4Z|1|BA|G|1444
4V4Z|1|BA|A|1444|||A
4V4Z|1|BA|C|1445
*
4V4Z|1|BA|G|1466
4V4Z|1|BA|C|1467
4V4Z|1|BA|C|1468
4V4Z|1|BA|A|1469
4V4Z|1|BA|G|1470
4V4Z|1|BA|A|1471
4V4Z|1|BA|A|1472
4V4Z|1|BA|G|1473
*
4V4Z|1|BA|C|1518
4V4Z|1|BA|G|1519
4V4Z|1|BA|U|1520
4V4Z|1|BA|G|1521
4V4Z|1|BA|G|1522
4V4Z|1|BA|U|1523
4V4Z|1|BA|G|1524
4V4Z|1|BA|G|1525
4V4Z|1|BA|G|1526
4V4Z|1|BA|G|1527
*
4V4Z|1|BA|C|1544
4V4Z|1|BA|A|1545
4V4Z|1|BA|A|1545|||A
4V4Z|1|BA|C|1546
4V4Z|1|BA|C|1547

Current chains

Chain BA

23S rRNA

Nearby chains