J4_4V54_002

3D structure

PDB id

4V54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V54|1|AA|C|183, 4V54|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V54|1|AA|G|142
4V54|1|AA|A|143
4V54|1|AA|G|144
*
4V54|1|AA|C|178
4V54|1|AA|A|179
4V54|1|AA|U|180
4V54|1|AA|A|181
4V54|1|AA|A|182
4V54|1|AA|C|183
4V54|1|AA|G|184
*
4V54|1|AA|C|193
4V54|1|AA|C|194
4V54|1|AA|A|195
4V54|1|AA|A|196
4V54|1|AA|A|197
4V54|1|AA|G|198
*
4V54|1|AA|U|219
4V54|1|AA|G|220
4V54|1|AA|C|221

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20