J4_4V57_016

3D structure

PDB id

4V57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V57|1|CA|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V57|1|CA|G|142
4V57|1|CA|A|143
4V57|1|CA|G|144
*
4V57|1|CA|C|178
4V57|1|CA|A|179
4V57|1|CA|U|180
4V57|1|CA|A|181
4V57|1|CA|A|182
4V57|1|CA|C|183
4V57|1|CA|G|184
*
4V57|1|CA|C|193
4V57|1|CA|C|194
4V57|1|CA|A|195
4V57|1|CA|A|196
4V57|1|CA|A|197
4V57|1|CA|G|198
*
4V57|1|CA|U|219
4V57|1|CA|G|220
4V57|1|CA|C|221

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CT

30S ribosomal protein S20