J4_4V5F_006

3D structure

PDB id

4V5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the ribosome with elongation factor G trapped in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAAG*CGCC*GAGG*CCGUAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5F|1|BA|C|297
4V5F|1|BA|G|298
4V5F|1|BA|A|299
4V5F|1|BA|A|300
4V5F|1|BA|G|301
*
4V5F|1|BA|C|316
4V5F|1|BA|G|317
4V5F|1|BA|C|318
4V5F|1|BA|C|319
*
4V5F|1|BA|G|323
4V5F|1|BA|A|324
4V5F|1|BA|G|325
4V5F|1|BA|G|326
*
4V5F|1|BA|C|336
4V5F|1|BA|C|337
4V5F|1|BA|G|338
4V5F|1|BA|U|339
4V5F|1|BA|A|340
4V5F|1|BA|G|341

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BF

50S RIBOSOMAL PROTEIN L4

Chain BY

50S RIBOSOMAL PROTEIN L24