J4_4V5G_018

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAG*CAUGUGGAC*GUCCAAAGG*CCGC

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|CA|G|142
4V5G|1|CA|A|143
4V5G|1|CA|G|144
*
4V5G|1|CA|C|178
4V5G|1|CA|A|179
4V5G|1|CA|U|180
4V5G|1|CA|G|181
4V5G|1|CA|U|182
4V5G|1|CA|G|183
4V5G|1|CA|G|184
4V5G|1|CA|A|185
4V5G|1|CA|C|186
*
4V5G|1|CA|G|191
4V5G|1|CA|U|192
4V5G|1|CA|C|193
4V5G|1|CA|C|194
4V5G|1|CA|A|195
4V5G|1|CA|A|196
4V5G|1|CA|A|197
4V5G|1|CA|G|198
4V5G|1|CA|G|199
*
4V5G|1|CA|C|218
4V5G|1|CA|C|219
4V5G|1|CA|G|220
4V5G|1|CA|C|221

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20