J4_4V5K_017
3D structure
- PDB id
- 4V5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAGG*CCAUGUGG*CCAAAG*CGC
- Length
- 21 nucleotides
- Bulged bases
- 4V5K|1|CA|A|197
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5K|1|CA|G|142
4V5K|1|CA|A|143
4V5K|1|CA|G|144
4V5K|1|CA|G|145
*
4V5K|1|CA|C|177
4V5K|1|CA|C|178
4V5K|1|CA|A|179
4V5K|1|CA|U|180
4V5K|1|CA|G|181
4V5K|1|CA|U|182
4V5K|1|CA|G|183
4V5K|1|CA|G|184
*
4V5K|1|CA|C|193
4V5K|1|CA|C|194
4V5K|1|CA|A|195
4V5K|1|CA|A|196
4V5K|1|CA|A|197
4V5K|1|CA|G|198
*
4V5K|1|CA|C|219
4V5K|1|CA|G|220
4V5K|1|CA|C|221
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CT
- 30S RIBOSOMAL PROTEIN S20
Coloring options: