J4_4V67_024
3D structure
- PDB id
- 4V67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a translation termination complex formed with release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGUCUAG
- Length
- 20 nucleotides
- Bulged bases
- 4V67|1|DA|U|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V67_024 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.4991
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V67|1|DA|C|601
4V67|1|DA|G|602
4V67|1|DA|A|603
4V67|1|DA|G|604
*
4V67|1|DA|C|624
4V67|1|DA|G|625
4V67|1|DA|U|626
4V67|1|DA|A|627
4V67|1|DA|G|628
*
4V67|1|DA|C|635
4V67|1|DA|G|636
4V67|1|DA|A|637
4V67|1|DA|G|638
*
4V67|1|DA|C|650
4V67|1|DA|G|651
4V67|1|DA|U|652
4V67|1|DA|C|653
4V67|1|DA|U|654
4V67|1|DA|A|655
4V67|1|DA|G|656
Current chains
- Chain DA
- 23S RRNA
Nearby chains
- Chain D8
- 50S ribosomal protein L35
- Chain DF
- 50S ribosomal protein L4
- Chain DP
- 50S ribosomal protein L15
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