J4_4V6A_027

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAAAGG*CCUGAC*GGG*CGG

Length

18 nucleotides

Bulged bases

4V6A|1|DA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|DA|C|2285
4V6A|1|DA|A|2286
4V6A|1|DA|A|2287
4V6A|1|DA|A|2288
4V6A|1|DA|G|2289
4V6A|1|DA|G|2290
*
4V6A|1|DA|C|2342
4V6A|1|DA|C|2343
4V6A|1|DA|U|2344
4V6A|1|DA|G|2345
4V6A|1|DA|A|2346
4V6A|1|DA|C|2347
*
4V6A|1|DA|G|2370
4V6A|1|DA|G|2371
4V6A|1|DA|G|2372
*
4V6A|1|DA|C|2381
4V6A|1|DA|G|2382
4V6A|1|DA|G|2383

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D0

50S ribosomal protein L27

Chain D6

50S ribosomal protein L33

Chain D8

50S ribosomal protein L35

Chain DC

50S ribosomal protein L1

Chain DS

50S ribosomal protein L18