J4_4V6C_019

3D structure

PDB id

4V6C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

GGAAGC*GCGCG*CAG*CGUAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6C|1|DA|G|297
4V6C|1|DA|G|298
4V6C|1|DA|A|299
4V6C|1|DA|A|300
4V6C|1|DA|G|301
4V6C|1|DA|C|302
*
4V6C|1|DA|G|315
4V6C|1|DA|C|316
4V6C|1|DA|G|317
4V6C|1|DA|C|318
4V6C|1|DA|G|319
*
4V6C|1|DA|C|323
4V6C|1|DA|A|324
4V6C|1|DA|G|325
*
4V6C|1|DA|C|337
4V6C|1|DA|G|338
4V6C|1|DA|U|339
4V6C|1|DA|A|340
4V6C|1|DA|C|341

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DE

50S ribosomal protein L4

Chain DU

50S ribosomal protein L24