J4_4V6E_002

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

4V6E|1|AA|C|183, 4V6E|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6E|1|AA|G|142
4V6E|1|AA|A|143
4V6E|1|AA|G|144
4V6E|1|AA|G|145
4V6E|1|AA|G|146
*
4V6E|1|AA|C|176
4V6E|1|AA|G|177
4V6E|1|AA|C|178
4V6E|1|AA|A|179
4V6E|1|AA|U|180
4V6E|1|AA|A|181
4V6E|1|AA|A|182
4V6E|1|AA|C|183
4V6E|1|AA|G|184
*
4V6E|1|AA|C|193
4V6E|1|AA|C|194
4V6E|1|AA|A|195
4V6E|1|AA|A|196
4V6E|1|AA|A|197
4V6E|1|AA|G|198
*
4V6E|1|AA|U|219
4V6E|1|AA|G|220
4V6E|1|AA|C|221

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20