J4_4V7L_026

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUUCC*GGGUUAG*CU*ACCCGUAC

Length

23 nucleotides

Bulged bases

4V7L|1|DA|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|DA|G|1310
4V7L|1|DA|G|1311
4V7L|1|DA|U|1312
4V7L|1|DA|U|1313
4V7L|1|DA|C|1314
4V7L|1|DA|C|1315
*
4V7L|1|DA|G|1337
4V7L|1|DA|G|1338
4V7L|1|DA|G|1339
4V7L|1|DA|U|1340
4V7L|1|DA|U|1341
4V7L|1|DA|A|1342
4V7L|1|DA|G|1343
*
4V7L|1|DA|C|1404
4V7L|1|DA|U|1405
*
4V7L|1|DA|A|1597
4V7L|1|DA|C|1598
4V7L|1|DA|C|1599
4V7L|1|DA|C|1600
4V7L|1|DA|G|1601
4V7L|1|DA|U|1602
4V7L|1|DA|A|1603
4V7L|1|DA|C|1604

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S ribosomal protein L34

Chain DX

50S ribosomal protein L23