J4_4V7L_030

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUG*CG*CCUAAGGUAG*CGAAAAG

Length

23 nucleotides

Bulged bases

4V7L|1|DA|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|DA|C|1832
4V7L|1|DA|U|1833
4V7L|1|DA|U|1834
4V7L|1|DA|G|1835
*
4V7L|1|DA|C|1905
4V7L|1|DA|G|1906
*
4V7L|1|DA|C|1924
4V7L|1|DA|C|1925
4V7L|1|DA|U|1926
4V7L|1|DA|A|1927
4V7L|1|DA|A|1928
4V7L|1|DA|G|1929
4V7L|1|DA|G|1930
4V7L|1|DA|U|1931
4V7L|1|DA|A|1932
4V7L|1|DA|G|1933
*
4V7L|1|DA|C|1967
4V7L|1|DA|G|1968
4V7L|1|DA|A|1969
4V7L|1|DA|A|1970
4V7L|1|DA|A|1971
4V7L|1|DA|A|1972
4V7L|1|DA|G|1973

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA

Chain CX

Transfer RNA; tRNA

Chain DD

50S ribosomal protein L2