J4_4V7T_016

3D structure

PDB id

4V7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

GAG*CAUAACGU*ACCAAAGA*UUGC

Length

23 nucleotides

Bulged bases

4V7T|1|CA|C|183, 4V7T|1|CA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7T|1|CA|G|142
4V7T|1|CA|A|143
4V7T|1|CA|G|144
*
4V7T|1|CA|C|178
4V7T|1|CA|A|179
4V7T|1|CA|U|180
4V7T|1|CA|A|181
4V7T|1|CA|A|182
4V7T|1|CA|C|183
4V7T|1|CA|G|184
4V7T|1|CA|U|185
*
4V7T|1|CA|A|192
4V7T|1|CA|C|193
4V7T|1|CA|C|194
4V7T|1|CA|A|195
4V7T|1|CA|A|196
4V7T|1|CA|A|197
4V7T|1|CA|G|198
4V7T|1|CA|A|199
*
4V7T|1|CA|U|218
4V7T|1|CA|U|219
4V7T|1|CA|G|220
4V7T|1|CA|C|221

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CT

30S ribosomal protein S20