J4_4V7U_002

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

4V7U|1|AA|C|183, 4V7U|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|AA|G|142
4V7U|1|AA|A|143
4V7U|1|AA|G|144
4V7U|1|AA|G|145
4V7U|1|AA|G|146
*
4V7U|1|AA|C|176
4V7U|1|AA|G|177
4V7U|1|AA|C|178
4V7U|1|AA|A|179
4V7U|1|AA|U|180
4V7U|1|AA|A|181
4V7U|1|AA|A|182
4V7U|1|AA|C|183
4V7U|1|AA|G|184
*
4V7U|1|AA|C|193
4V7U|1|AA|C|194
4V7U|1|AA|A|195
4V7U|1|AA|A|196
4V7U|1|AA|A|197
4V7U|1|AA|G|198
*
4V7U|1|AA|U|219
4V7U|1|AA|G|220
4V7U|1|AA|C|221

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20