J4_4V7U_022

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUUCC*GGGUGAG*CUUG*CAAAUCGUAC

Length

27 nucleotides

Bulged bases

4V7U|1|DA|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DA|G|1310
4V7U|1|DA|G|1311
4V7U|1|DA|U|1312
4V7U|1|DA|U|1313
4V7U|1|DA|C|1314
4V7U|1|DA|C|1315
*
4V7U|1|DA|G|1337
4V7U|1|DA|G|1338
4V7U|1|DA|G|1339
4V7U|1|DA|U|1340
4V7U|1|DA|G|1341
4V7U|1|DA|A|1342
4V7U|1|DA|G|1343
*
4V7U|1|DA|C|1404
4V7U|1|DA|U|1405
4V7U|1|DA|U|1406
4V7U|1|DA|G|1407
*
4V7U|1|DA|C|1595
4V7U|1|DA|A|1596
4V7U|1|DA|A|1597
4V7U|1|DA|A|1598
4V7U|1|DA|U|1599
4V7U|1|DA|C|1600
4V7U|1|DA|G|1601
4V7U|1|DA|U|1602
4V7U|1|DA|A|1603
4V7U|1|DA|C|1604

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34

Chain DT

50S ribosomal protein L23