J4_4V8O_001

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GAGUAACGC*GUC*GUAG*CC

Length

18 nucleotides

Bulged bases

4V8O|1|AA|C|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|AA|G|115
4V8O|1|AA|A|116
4V8O|1|AA|G|117
4V8O|1|AA|U|118
4V8O|1|AA|A|119
4V8O|1|AA|A|120
4V8O|1|AA|C|121
4V8O|1|AA|G|122
4V8O|1|AA|C|123
*
4V8O|1|AA|G|238
4V8O|1|AA|U|239
4V8O|1|AA|C|240
*
4V8O|1|AA|G|286
4V8O|1|AA|U|287
4V8O|1|AA|A|288
4V8O|1|AA|G|289
*
4V8O|1|AA|C|311
4V8O|1|AA|C|312

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AP

30S RIBOSOMAL PROTEIN S16

Chain AQ

30S RIBOSOMAL PROTEIN S17