J4_4V90_002

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GAG*CAUGUG*CAAAGG*CCGC

Length

19 nucleotides

Bulged bases

4V90|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V90|1|AA|G|142
4V90|1|AA|A|143
4V90|1|AA|G|144
*
4V90|1|AA|C|178
4V90|1|AA|A|179
4V90|1|AA|U|180
4V90|1|AA|G|181
4V90|1|AA|U|182
4V90|1|AA|G|183
*
4V90|1|AA|C|194
4V90|1|AA|A|195
4V90|1|AA|A|196
4V90|1|AA|A|197
4V90|1|AA|G|198
4V90|1|AA|G|199
*
4V90|1|AA|C|218
4V90|1|AA|C|219
4V90|1|AA|G|220
4V90|1|AA|C|221

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AT

30S RIBOSOMAL PROTEIN S20