J4_4V92_001

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUUAAAUC*GCCC*GGUAAC*GG

Length

21 nucleotides

Bulged bases

4V92|1|A2|A|359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|C|99
4V92|1|A2|A|100
4V92|1|A2|U|101
4V92|1|A2|U|102
4V92|1|A2|A|103
4V92|1|A2|A|104
4V92|1|A2|A|105
4V92|1|A2|U|106
4V92|1|A2|C|107
*
4V92|1|A2|G|307
4V92|1|A2|C|308
4V92|1|A2|C|309
4V92|1|A2|C|310
*
4V92|1|A2|G|356
4V92|1|A2|G|357
4V92|1|A2|U|358
4V92|1|A2|A|359
4V92|1|A2|A|360
4V92|1|A2|C|361
*
4V92|1|A2|G|383
4V92|1|A2|G|384

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BE

ES4

Chain BI

ES8

Chain BJ

US4

Chain BX

US12