J4_4V9H_012

3D structure

PDB id

4V9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state

Experimental method

X-RAY DIFFRACTION

Resolution

2.86 Å

Loop

Sequence

UUG*CG*CCUAAGGUAG*CGAAAA

Length

21 nucleotides

Bulged bases

4V9H|1|BA|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9H|1|BA|U|1833
4V9H|1|BA|U|1834
4V9H|1|BA|G|1835
*
4V9H|1|BA|C|1905
4V9H|1|BA|G|1906
*
4V9H|1|BA|C|1924
4V9H|1|BA|C|1925
4V9H|1|BA|U|1926
4V9H|1|BA|A|1927
4V9H|1|BA|A|1928
4V9H|1|BA|G|1929
4V9H|1|BA|G|1930
4V9H|1|BA|U|1931
4V9H|1|BA|A|1932
4V9H|1|BA|G|1933
*
4V9H|1|BA|C|1967
4V9H|1|BA|G|1968
4V9H|1|BA|A|1969
4V9H|1|BA|A|1970
4V9H|1|BA|A|1971
4V9H|1|BA|A|1972

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AV

Transfer RNA; tRNA

Chain BD

50S ribosomal protein L2