J4_4V9K_026
3D structure
- PDB id
- 4V9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAC*GC*GGGAAG*UGACAACC
- Length
- 19 nucleotides
- Bulged bases
- 4V9K|1|DA|A|144|||B, 4V9K|1|DA|C|1544
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V9K|1|DA|G|1444
4V9K|1|DA|A|144|||B
4V9K|1|DA|C|1445
*
4V9K|1|DA|G|1466
4V9K|1|DA|C|1467
*
4V9K|1|DA|G|1525
4V9K|1|DA|G|1526
4V9K|1|DA|G|1527
4V9K|1|DA|A|1528
4V9K|1|DA|A|1529
4V9K|1|DA|G|1530
*
4V9K|1|DA|U|1541
4V9K|1|DA|G|1542
4V9K|1|DA|A|1543
4V9K|1|DA|C|1544
4V9K|1|DA|A|1545
4V9K|1|DA|A|1546
4V9K|1|DA|C|154|||B
4V9K|1|DA|C|1547
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: