J4_4V9P_051

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUG*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

4V9P|1|GA|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9P|1|GA|C|1833
4V9P|1|GA|U|1834
4V9P|1|GA|G|1835
*
4V9P|1|GA|C|1905
4V9P|1|GA|G|1906
*
4V9P|1|GA|C|1924
4V9P|1|GA|C|1925
4V9P|1|GA|U|1926
4V9P|1|GA|A|1927
4V9P|1|GA|A|1928
4V9P|1|GA|G|1929
4V9P|1|GA|G|1930
4V9P|1|GA|U|1931
4V9P|1|GA|A|1932
4V9P|1|GA|G|1933
*
4V9P|1|GA|C|1967
4V9P|1|GA|G|1968
4V9P|1|GA|A|1969
4V9P|1|GA|A|1970
4V9P|1|GA|U|1971
4V9P|1|GA|G|1972

Current chains

Chain GA

23S rRNA

Nearby chains

Chain GC

50S ribosomal protein L2

Chain HA

Small subunit ribosomal RNA; SSU rRNA