J4_4V9R_016

3D structure

PDB id

4V9R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGG*CCAUGUG*CAAAG*CGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9R|1|CA|G|142
4V9R|1|CA|A|143
4V9R|1|CA|G|144
4V9R|1|CA|G|145
*
4V9R|1|CA|C|177
4V9R|1|CA|C|178
4V9R|1|CA|A|179
4V9R|1|CA|U|180
4V9R|1|CA|G|181
4V9R|1|CA|U|182
4V9R|1|CA|G|183
*
4V9R|1|CA|C|194
4V9R|1|CA|A|195
4V9R|1|CA|A|196
4V9R|1|CA|A|197
4V9R|1|CA|G|198
*
4V9R|1|CA|C|219
4V9R|1|CA|G|220
4V9R|1|CA|C|221

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CT

30S Ribosomal Protein S20