J4_4WF9_001

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CC*GAGUAC*GGAAUCUG*UAAG

Length

20 nucleotides

Bulged bases

4WF9|1|X|U|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_45801.6

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW

Number of instances in this motif group

7

Unit IDs

4WF9|1|X|C|271
4WF9|1|X|C|272
*
4WF9|1|X|G|416
4WF9|1|X|A|417
4WF9|1|X|G|418
4WF9|1|X|U|419
4WF9|1|X|A|420
4WF9|1|X|C|421
*
4WF9|1|X|G|445
4WF9|1|X|G|446
4WF9|1|X|A|447
4WF9|1|X|A|448
4WF9|1|X|U|449
4WF9|1|X|C|450
4WF9|1|X|U|451
4WF9|1|X|G|452
*
4WF9|1|X|U|467
4WF9|1|X|A|468
4WF9|1|X|A|469
4WF9|1|X|G|470

Current chains

Chain X

23S ribosomal RNA

Nearby chains